Guide

Electronic CAPA workflow for medical device manufacturers: ISO 13485, FDA and Power Platform

This guide is for the management board, quality director and operations director of a company that manufactures medical devices and runs its corrective actions in Excel, Word and email. We explain what ISO 13485, the MDR and the FDA really require, how to build a CAPA workflow in Microsoft 365 and Power Platform, and where companies most often go wrong before an audit.

Author: Kacper Włodarczyk, CEO of ALGORCOMPPublished: May 14, 2026Reading time: 12 min readBusiness process automationFor: Enterprise
Electronic CAPA workflow for medical device manufacturers: ISO 13485, FDA and Power Platform

What CAPA is and why Excel and email stop being enough

CAPA stands for Corrective and Preventive Action. Through it, a company establishes the cause of a problem, removes it and checks that the problem does not come back. In ISO 13485 it is covered by clauses 8.5.2 and 8.5.3.

Take a hypothetical medical device manufacturer with 150 employees. It keeps its CAPA register in Excel and its root cause analyses in Word, and decisions are made by email. Before an audit, the quality manager spends several days gathering evidence from three places and checking which version of a form is final.

This set-up has three weak points. You cannot see who changed a record and when. Deadlines are tracked by one person, so an effectiveness check due several months later is easily missed. And the evidence that actions were carried out sits in individual employees’ mailboxes.

Which regulations and standards set requirements for a CAPA system

The requirements come from several sources that are often confused. In the table below we have summarised what each of them means for the IT system, not for the quality management system as a whole.

Two things have changed recently or are often described incorrectly. Since 2 February 2026, the FDA has applied the QMSR, which replaced the old text of 21 CFR 820 and refers to ISO 13485:2016. Companies selling in the US and the EU therefore have a common reference point for CAPA – ISO 13485 – although the QMSR adds a few requirements of its own.

The second issue is the record retention period. ISO 13485 does not set a fixed “5 years”: records must be kept for the lifetime of the device, and for no less than 2 years from its release by the manufacturer. In the EU, the MDR’s 10 or 15 years apply on top of this, so the system must keep data for longer than a typical company archive.

Sources of requirements and what they mean for a CAPA system
SourceWho it applies toWhat it means for the system
ISO 13485:2016 (clauses 8.5.2, 8.5.3, 4.2.5, 4.1.6)Every manufacturer with a certified quality management systemA documented CAPA procedure, records with visible changes, software validation proportionate to risk
MDR – Regulation (EU) 2017/745Devices placed on the EU marketDocumentation kept for 10 years (15 years for implants); CAPA data feeds post-market surveillance and periodic reports
FDA QMSR – 21 CFR 820 (from 2 February 2026)Devices sold in the USCAPA requirements based on ISO 13485:2016; FDA inspections under the new inspection programme
FDA 21 CFR Part 11Electronic records required by the FDAA system-generated audit trail, electronic signature rules, validation
Electronic CAPA workflow for medical device manufacturers: ISO 13485, FDA and Power Platform

The five stages of CAPA and what the system must record at each one

Whatever the tool, a CAPA case goes through the same stages. For each one it is worth deciding in advance who is responsible, how much time they have and what evidence they leave in the system:

  • Registration – the source of the case (a complaint, an audit nonconformity, a production problem, a signal from the market), a unique number, the date, a description and an initial severity assessment.
  • Root cause analysis – a named person, a deadline and the result of the analysis using the “5 whys” method, an Ishikawa diagram (a fishbone-shaped chart that organises the possible causes) or a risk analysis.
  • Action plan – a list of actions, each with a responsible person, a deadline and a success criterion, approved by the quality manager.
  • Implementation – evidence of completion for each action, such as an updated work instruction, a training record or a test report.
  • Effectiveness check – after an agreed period, someone confirms with data that the problem has not come back. Only then can the case be closed.

How to build a CAPA workflow in Microsoft 365 and Power Platform

In a company that already has Microsoft 365, a CAPA workflow usually consists of four elements. SharePoint stores the documents: analysis reports, plans and evidence of completion. Dataverse, the Power Platform database, holds the CAPA cases themselves, with fields such as status, deadline, device and cause.

Power Automate sends tasks and reminders and escalates cases when deadlines pass. Power Apps provides forms for the quality department, and Teams provides notifications and simple approvals. Power BI shows the management board how many cases are open, how long they take and where they come from.

Three settings decide whether the whole thing will pass an audit. First, auditing in Dataverse has to be switched on for the environment, the table and the columns – it does not switch itself on. It records who changed a field, when, and what the previous value was.

Second, the permission to delete the change history must be limited to a very small group of people – ideally no one from the quality department. Third, a single Power Automate flow run lasts at most 30 days. So plan an effectiveness check due several months later as a daily check of deadlines, not as a flow that waits.

A quality manager reviews the change history of a CAPA case on a computer screen

An auditor does not judge whether a CAPA system is modern – they judge whether the records show who made each decision, when, and on what basis.

Part 11-compliant electronic signatures: what is required and what is only recommended

Many myths have grown up around electronic signatures. 21 CFR 11.200 requires two distinct identification components, such as an ID and a password. Multi-factor authentication, i.e. an extra code from a phone, is good practice, but the regulation does not require it.

The signature must show the signer’s full name, the date and time, and the meaning of the signature, such as “I approve the action plan” (11.50). It must be permanently linked to the record, so that it cannot be copied to another document (11.70).

There is also an obligation that companies are often unaware of. Before using electronic signatures, you must certify to the FDA in writing that they are the legally binding equivalent of handwritten signatures (11.100). In Microsoft 365, the signature is usually built in Power Apps: the user re-enters their sign-in details through Microsoft Entra ID, enters the meaning, and the record is saved in Dataverse.

Companies that sell only in the EU are not subject to Part 11. The MDR has no equivalent, and the requirements come from ISO 13485: a record must be legible and every change must be identifiable. Many companies design their system to Part 11 anyway, so they do not have to rebuild it when entering the US market.

Validation: why it is necessary and how much documentation you really need

Validation is documented evidence that a system does what the company requires of it. ISO 13485 requires it before software is first used in the quality management system and after every significant change. An application built by an employee and used for CAPA cases without validation is a common audit nonconformity.

You validate the specific application, not the whole platform. For Microsoft 365 and Power Platform, Microsoft publishes GxP guidelines – a description of good practice for regulated industries such as pharmaceuticals and medical devices. They describe Microsoft’s safeguards and how responsibility is split with the customer. This helps when assessing the supplier, but it does not replace testing your application.

The scope of validation should follow from risk, not from a habit of filling thick binders. ISO 13485 and the FDA’s September 2025 guidance on software assurance put it the same way. Functions that affect decisions about device safety are tested in detail; a report showing the number of open cases is tested more lightly.

In practice you prepare user requirements, a risk assessment of the functions, test scripts and a report with the results. Every later change to the application goes through change control and an assessment of whether it needs retesting. That is why validation is planned from the start of the project, together with the quality department.

When Microsoft 365 is enough, and when an off-the-shelf quality system is better

Not every company should build its own CAPA system. Off-the-shelf quality management systems for the medical sector have validated modules and validation documentation packages from the vendor. However, they require separate licences and add yet another place people have to log in to. The comparison in the table below will help you choose a direction.

Comparison of approaches to electronic CAPA
ApproachWhen it makes senseWhat to watch out for
CAPA workflow in Microsoft 365 and Power PlatformThe company works on Microsoft 365, has between a dozen and a few dozen cases a year and wants one place for documentsYou handle validation and maintenance yourself; every change to the application requires change control
Off-the-shelf quality management system for the medical sectorA large number of cases, several sites, a need for ready-made modules for complaints, training and change controlSeparate licences, less flexibility, and you still have to validate the configuration
A combination of bothThe off-the-shelf system is the main register, and Microsoft 365 handles documents, notifications and reportsThe connection between the systems also has to be validated and maintained

The most common mistakes when implementing electronic CAPA

Most audit problems do not stem from the choice of tool but from skipped steps. These are the most common:

  • Moving the current process into an application without simplifying it – unnecessary signatures and unclear roles remain, they are just replicated faster.
  • Launching the application before validation, “as a trial”, on real CAPA cases.
  • Dataverse auditing switched off or incomplete, because no one knew it had to be switched on for each table.
  • No automatic reminder about the effectiveness check – the case is formally closed, but the improvement is not documented.
  • No link to the training records: a procedure was changed as part of a CAPA, but there is no evidence that people have learned it.
  • Changes to the application made directly in the production environment – the version people work in – without change control.

Where to start: the first steps

The first step is not choosing a tool but assessing the current process. The following order works in most companies:

  • Review the last dozen or so CAPA cases and note where the records are, how long each stage took and what evidence was missing.
  • Write down a simplified process: stages, roles, deadlines, closure criteria and rules for covering absences.
  • Decide whether you will build in Microsoft 365, buy an off-the-shelf system or combine the two approaches.
  • Prepare the user requirements and the risk assessment – these are the first validation documents and, at the same time, the specification for the team building the application.
  • Build, test and validate the application, and only then move new cases into it. Finish open cases in the old way.

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FAQ

Electronic CAPA workflow – frequently asked questions

Questions that quality departments and management boards ask when deciding to move CAPA into a system.

Does every complaint have to lead to a CAPA case?
No. ISO 13485 requires you to assess whether corrective action is needed, in proportion to the effects of the problem. A well-written procedure sets out the criteria for opening a CAPA, and the system can suggest a decision based on the severity and recurrence of complaints.
Can CAPA data be stored in the Microsoft cloud?
Yes, the regulations do not prohibit it. However, you must assess Microsoft as a supplier, set data storage to the appropriate region and ensure access to the records for the whole required period. Microsoft’s GxP guidelines help with this assessment.
Can artificial intelligence write root cause analysis reports?
It can prepare a draft, for example by pulling together similar past cases or recurring causes. The decision and the signature stay with a person. If an AI function affects quality records, include it in the risk assessment and validation like the rest of the system.
What should we do with old cases kept in Excel and on paper?
You do not have to move them into the new system. But they must remain accessible and legible for the whole required retention period. Many companies close the old register as of a cut-off date and keep it as a read-only archive.
How do we show the CAPA system to an auditor?
Prepare a read-only account and the current version of the validation report. An auditor usually picks a few cases and asks you to reconstruct their history. Rehearse this before the audit on a case that has gone through the full cycle, including the effectiveness check.

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About the author

Kacper Włodarczyk — CEO of ALGORCOMP

Kacper Włodarczyk

CEO of ALGORCOMP

Kacper specializes in implementing Microsoft 365 Copilot, Copilot Studio, Power Platform (Power Automate, Power Apps, SharePoint) and AI agents for mid-sized B2B companies in Poland. He leads dozens of projects covering AI strategy, Power Platform governance, document workflow automation and sales processes. In his writing he focuses on the practical side of AI adoption in organizations — from the first proof of concept to company-wide rollout — with particular attention to data security, compliance (GDPR, NIS2, the AI Act) and return on investment.

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